STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET01726.15-histidylcysteine sulfoxide synthase/putative 4-mercaptohistidine N1-methyltranferase. (704 aa)    
Predicted Functional Partners:
SET01748.1
Cystathione beta-lyase.
 
  
  0.912
SES90051.1
ADP-ribosylglycohydrolase.
 
     0.662
ribB
GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.602
SES97967.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
 0.592
SET56433.1
ADP-ribosylglycohydrolase.
 
     0.580
SET15387.1
Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.
  
 
 0.576
SET15030.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
  
 
  0.543
SES69608.1
Short chain dehydrogenase.
    
 0.524
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.
  
 
 0.511
SET00463.1
Predicted secreted hydrolase.
  
  
 0.503
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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