STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET04410.1Hypothetical protein. (302 aa)    
Predicted Functional Partners:
SES71284.1
Hypothetical protein.
  
     0.774
SET12879.1
Putative exosortase-associated protein, TIGR04073 family.
  
     0.774
SES64325.1
Small metal-binding protein.
  
     0.773
SES89420.1
Putative exosortase-associated protein, TIGR04073 family.
  
     0.772
SES99914.1
Ammonia monooxygenase subunit B.
  
     0.771
SET53465.1
Putative exosortase-associated protein, TIGR04073 family.
  
     0.771
SES99874.1
Ammonia monooxygenase subunit A.
  
     0.769
SES71263.1
Multicopper oxidase.
  
     0.768
SET27324.1
Protein of unknown function.
  
     0.766
SES76935.1
MutS domain III.
  
     0.757
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.