STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET11297.1O-antigen ligase. (414 aa)    
Predicted Functional Partners:
SET00320.1
Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.915
SET48316.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
  
 0.915
SET05059.1
Hypothetical protein.
 
  
 0.842
SET11266.1
Predicted O-methyltransferase YrrM.
       0.837
SES80996.1
Dolichol-phosphate mannosyltransferase.
 
  
 0.814
SET11324.1
Methyltransferase, FkbM family.
 
     0.804
SET11476.1
Phosphoglycolate phosphatase, HAD superfamily.
 
     0.783
SET12387.1
Hypothetical protein.
  
     0.772
SET01154.1
Outer membrane protein (porin).
  
    0.771
SET17406.1
Outer membrane protein (porin).
  
    0.768
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.