STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET65469.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
SES99914.1
Ammonia monooxygenase subunit B.
 
     0.794
SES99874.1
Ammonia monooxygenase subunit A.
 
     0.788
SES99848.1
Methane/ammonia monooxygenase subunit C.
  
     0.774
SET02587.1
Methane/ammonia monooxygenase subunit C.
  
     0.774
SET18459.1
Methane/ammonia monooxygenase subunit C.
  
     0.774
SET00012.1
Putative copper resistance protein D.
 
    0.736
SET27192.1
Putative copper resistance protein D.
 
    0.724
SET68580.1
Aerobic hydroxylamine oxidoreductase precursor.
  
     0.712
SES64325.1
Small metal-binding protein.
  
     0.699
SET07666.1
Hypothetical protein.
  
     0.653
Your Current Organism:
Nitrosomonas marina
NCBI taxonomy Id: 917
Other names: N. marina, Nitrosomonas marina Koops et al. 2001, strain Nm 22
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.