STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP91463.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (557 aa)    
Predicted Functional Partners:
AMP92907.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
 0.865
AMP93082.1
Non-ribosomal peptide synthetase/polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.865
AMP93740.1
Tyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.822
AMP91464.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.812
AMP91741.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.781
AMP92167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.780
AMP92851.1
Microtubule-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.776
AMP92145.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.766
AMP93378.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.762
AMP91114.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
Your Current Organism:
Legionella pneumophila pascullei
NCBI taxonomy Id: 91890
Other names: ATCC 33737, CCUG 31226 A, CIP 105570, DSM 7515, L. pneumophila subsp. pascullei, Legionella pneumophila subsp. pascullei, NCTC 12273, strain U8W
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.