STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMP91531.1Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)    
Predicted Functional Partners:
AMP92825.1
Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.733
AMP91514.1
Type IV secretion protein IcmJ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
AMP93822.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
AMP91532.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.534
AMP91505.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.532
AMP91508.1
Type IV secretion protein DotI; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.531
AMP93612.1
Type IV secretion system protein DotC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
AMP93623.1
Type IV secretion protein DotA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
AMP93578.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.512
AMP92367.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.499
Your Current Organism:
Legionella pneumophila pascullei
NCBI taxonomy Id: 91890
Other names: ATCC 33737, CCUG 31226 A, CIP 105570, DSM 7515, L. pneumophila subsp. pascullei, Legionella pneumophila subsp. pascullei, NCTC 12273, strain U8W
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.