STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pbuEMFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (381 aa)    
Predicted Functional Partners:
APF02057.1
Pyoverdine biosynthesis protein PvcB; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
mhpA
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
APF02060.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.798
APF02056.1
Pyoverdine biosynthesis protein PvcA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
yybR_2
HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
cynR_2
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
       0.542
yybR_1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
APF03785.1
Fatty acyl-AMP ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.514
APF02061.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.469
aas
ACP synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.457
Your Current Organism:
Legionella pneumophila fraseri
NCBI taxonomy Id: 91892
Other names: ATCC 33156, CCUG 13398, CIP 103858, DSM 7514, L. pneumophila subsp. fraseri, Legionella pneumophila subsp. fraseri, NCTC 11233, strain Los Angeles 1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.