STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_11610Uncharacterized protein. (858 aa)    
Predicted Functional Partners:
PV08_03824
Uncharacterized protein.
    
 0.680
PV08_02293
GH16 domain-containing protein.
    
 0.680
PV08_00074
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.654
PV08_07674
Uncharacterized protein.
    
 0.646
PV08_09388
UBA domain-containing protein.
    
  0.640
ALG13
UDP-N-acetylglucosamine transferase subunit ALG13; Involved in protein N-glycosylation. Essential for the second step of the dolichol-linked oligosaccharide pathway.
     
 0.639
PV08_02630
E3 ubiquitin-protein ligase.
    
 0.635
PV08_11246
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.633
PV08_06683
Protein kinase domain-containing protein.
     
 0.620
PV08_04300
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
     
 0.616
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.