PV08_10245 protein (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PV08_10245

Fe2OG dioxygenase domain-containing protein. (762 aa)

Predicted Functional Partners:

PV08_08970

0.749

PV08_06529

0.716

PV08_04019

0.657

PV08_11582

0.621

PV08_09856

0.602

PV08_11937

0.570

PV08_09944

0.542

PV08_06202

0.542

PV08_05136

0.542

PV08_01846

0.542

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_01846	PV08_10245	A0A0D1Z0V4	A0A0D1Y7Q2	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.542
PV08_04019	PV08_06529	A0A0D2BZP9	A0A0D2BCZ3	Uncharacterized protein.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.682
PV08_04019	PV08_08970	A0A0D2BZP9	A0A0D2BR96	Uncharacterized protein.	1,4-alpha-glucan-branching enzyme.	0.867
PV08_04019	PV08_10245	A0A0D2BZP9	A0A0D1Y7Q2	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.657
PV08_05136	PV08_10245	A0A0D1YRT0	A0A0D1Y7Q2	Amidase domain-containing protein.	Fe2OG dioxygenase domain-containing protein.	0.542
PV08_06202	PV08_10245	A0A0D1YMA8	A0A0D1Y7Q2	Uncharacterized protein.	Fe2OG dioxygenase domain-containing protein.	0.542
PV08_06529	PV08_04019	A0A0D2BCZ3	A0A0D2BZP9	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Uncharacterized protein.	0.682
PV08_06529	PV08_08970	A0A0D2BCZ3	A0A0D2BR96	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	1,4-alpha-glucan-branching enzyme.	0.992
PV08_06529	PV08_09856	A0A0D2BCZ3	A0A0D2B111	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.922
PV08_06529	PV08_10245	A0A0D2BCZ3	A0A0D1Y7Q2	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Fe2OG dioxygenase domain-containing protein.	0.716
PV08_06529	PV08_11582	A0A0D2BCZ3	A0A0D2AV76	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	0.989
PV08_06529	PV08_11937	A0A0D2BCZ3	A0A0D1Y4G2	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.984
PV08_08970	PV08_04019	A0A0D2BR96	A0A0D2BZP9	1,4-alpha-glucan-branching enzyme.	Uncharacterized protein.	0.867
PV08_08970	PV08_06529	A0A0D2BR96	A0A0D2BCZ3	1,4-alpha-glucan-branching enzyme.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.992
PV08_08970	PV08_09856	A0A0D2BR96	A0A0D2B111	1,4-alpha-glucan-branching enzyme.	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	0.947
PV08_08970	PV08_10245	A0A0D2BR96	A0A0D1Y7Q2	1,4-alpha-glucan-branching enzyme.	Fe2OG dioxygenase domain-containing protein.	0.749
PV08_08970	PV08_11582	A0A0D2BR96	A0A0D2AV76	1,4-alpha-glucan-branching enzyme.	Phosphoglucomutase; Belongs to the phosphohexose mutase family.	0.984
PV08_08970	PV08_11937	A0A0D2BR96	A0A0D1Y4G2	1,4-alpha-glucan-branching enzyme.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.987
PV08_09856	PV08_06529	A0A0D2B111	A0A0D2BCZ3	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.922
PV08_09856	PV08_08970	A0A0D2B111	A0A0D2BR96	Phosphoacetylglucosamine mutase; Catalyzes the conversion of GlcNAc-6-P into GlcNAc-1-P during the synthesis of uridine diphosphate/UDP-GlcNAc, which is a biosynthetic precursor of chitin and also supplies the amino sugars for N-linked oligosaccharides of glycoproteins. Belongs to the phosphohexose mutase family.	1,4-alpha-glucan-branching enzyme.	0.947