STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09350ASXH domain-containing protein. (196 aa)    
Predicted Functional Partners:
PV08_02648
Ubiquitin carboxyl-terminal hydrolase.
    
 0.882
PV08_04241
Uncharacterized protein.
    
 0.795
PV08_05339
Uncharacterized protein.
    
 0.651
PV08_00928
UV excision repair protein Rad23.
    
 0.490
PV08_00223
Polyubiquitin.
    
  0.457
PV08_10350
Ubiquitin-40S ribosomal protein S27a.
    
  0.446
PV08_11376
BZIP domain-containing protein.
    
  0.446
PV08_08261
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.435
PV08_01824
MHYT domain-containing protein.
    
  0.435
PV08_05700
MRG domain-containing protein.
    
  0.432
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.