STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09436Glyco_trans_2-like domain-containing protein. (915 aa)    
Predicted Functional Partners:
PV08_03340
Uncharacterized protein.
    
 
 0.796
PV08_04267
BAR domain-containing protein.
    
 0.753
PV08_09388
UBA domain-containing protein.
   
 0.730
PV08_09600
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.713
PV08_05199
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.684
PV08_02913
Uncharacterized protein.
    
 0.640
PV08_07014
Uncharacterized protein.
    
 0.630
PV08_11246
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.609
PV08_06555
AP-1 complex subunit gamma.
    
 0.594
PV08_07868
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.578
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.