STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_08068PGA_cap domain-containing protein. (394 aa)    
Predicted Functional Partners:
PV08_00465
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.635
PV08_07418
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.626
PV08_08665
Uncharacterized protein.
   
 
 0.584
PV08_06786
Uncharacterized protein.
   
 
 0.584
PV08_02980
Uncharacterized protein.
    
 0.536
PV08_07832
C3H1-type domain-containing protein.
    
 0.536
PV08_01106
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
 
 0.459
PV08_01788
Uncharacterized protein.
    
 0.441
PV08_10206
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.439
PV08_01690
Pex2_Pex12 domain-containing protein.
    
   0.429
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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