STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_08504Uncharacterized protein. (433 aa)    
Predicted Functional Partners:
PV08_04979
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.948
PV08_09065
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.943
PV08_00201
ATP-dependent RNA helicase eIF4A; Belongs to the DEAD box helicase family.
   
 0.937
PV08_11207
Uncharacterized protein.
   
 0.890
PV08_01836
RRM domain-containing protein.
   
 0.886
PV08_07627
Nuclear cap-binding protein subunit 2.
    
 0.873
PV08_03053
Uncharacterized protein.
    
 0.863
PV08_06322
Uncharacterized protein.
   
 
 0.860
PV08_07409
S1 motif domain-containing protein.
   
 0.840
PV08_07623
W2 domain-containing protein.
   
 0.830
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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