STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_05321Uncharacterized protein. (521 aa)    
Predicted Functional Partners:
PV08_07837
tRNA (Guanine(9)-N1)-methyltransferase.
   
 0.662
PV08_09151
Glyceraldehyde-3-phosphate dehydrogenase.
   
  
 0.544
PV08_04839
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.527
PV08_05309
Uncharacterized protein.
   
 
 0.522
PV08_11625
TATA-box-binding protein.
   
    0.521
PV08_06475
BTB domain-containing protein.
   
    0.521
PV08_01564
Uncharacterized protein.
   
    0.521
PV08_07169
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.484
PV08_04161
Uncharacterized protein.
    
 0.484
PV08_02281
Uncharacterized protein.
    
 0.484
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.