STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_05766Uncharacterized protein. (244 aa)    
Predicted Functional Partners:
PV08_01271
Uncharacterized protein.
    
 
 0.988
PV08_07500
Uncharacterized protein.
    
 0.918
PV08_03027
Uncharacterized protein.
    
 0.918
PV08_11407
Uncharacterized protein.
    
 
 0.895
PV08_01681
Uncharacterized protein.
    
   0.882
PV08_01981
Uncharacterized protein.
    
 0.877
PV08_00928
UV excision repair protein Rad23.
   
 0.870
PV08_01883
WD_REPEATS_REGION domain-containing protein.
    
 0.807
PV08_05671
Uncharacterized protein; Belongs to the actin family.
    
 0.804
PV08_04231
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
   
 0.780
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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