STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_03075Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor. (225 aa)    
Predicted Functional Partners:
PV08_06417
t-SNARE coiled-coil homology domain-containing protein.
    
 0.999
PV08_05952
Protein transport protein BOS1; SNARE required for protein transport between the ER and the Golgi complex.
   
 0.999
PV08_02336
t-SNARE coiled-coil homology domain-containing protein.
    
 0.999
PV08_00900
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.996
PV08_11386
Uncharacterized protein.
    
 0.985
PV08_03884
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 
 0.982
PV08_10206
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.982
PV08_06285
Uncharacterized protein.
    
 0.977
PV08_03038
Uncharacterized protein.
    
 
 0.945
PV08_11990
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 
 0.942
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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