STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_00250DNA_mis_repair domain-containing protein. (940 aa)    
Predicted Functional Partners:
PV08_09171
DNA_mis_repair domain-containing protein.
  
 
0.989
PV08_10647
DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.980
PV08_05027
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.975
PV08_04035
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.965
PV08_04922
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.947
PV08_09929
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.945
PV08_04905
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.943
PV08_05144
Uncharacterized protein.
  
 0.927
PV08_10769
Uncharacterized protein.
   
 0.908
PV08_04274
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.884
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.