STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_00866Amine oxidase. (604 aa)    
Predicted Functional Partners:
PV08_05916
Tryptophan synthase.
     
 0.731
PV08_12046
Tryptophan synthase.
     
 0.731
PV08_12009
Tryptophan synthase.
     
 0.731
PV08_12066
Tryptophan synthase.
     
 0.731
PV08_10214
Histone H2B; Belongs to the histone H2B family.
    
  0.657
PV08_10984
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.653
PV08_02922
Histone deacetylase RPD3.
    
 0.653
PV08_08933
WD_REPEATS_REGION domain-containing protein.
    
 0.650
PV08_01723
Uncharacterized protein.
   
 0.644
PV08_10773
Uncharacterized protein.
    
 0.634
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.