STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_11983Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c. (321 aa)    
Predicted Functional Partners:
PV08_09685
Protoheme IX farnesyltransferase.
   
 
 0.868
PV08_00403
Cytochrome c heme lyase; Links covalently the heme group to the apoprotein of cytochrome c.
  
 
0.793
PV08_05710
Uncharacterized protein.
   
  
 0.766
PV08_01106
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.755
PV08_04903
Cytochrome c1, heme protein, mitochondrial.
   
 
 0.662
PV08_11145
Uncharacterized protein.
   
    0.579
PV08_06849
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
   
 
 0.536
PV08_10826
Epimerase domain-containing protein.
   
 
 0.523
PV08_00667
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial; Belongs to the complex I 49 kDa subunit family.
   
  
 0.496
PV08_01665
Exonuclease domain-containing protein.
      
 0.456
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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