STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_11077Uncharacterized protein. (476 aa)    
Predicted Functional Partners:
PV08_03340
Uncharacterized protein.
   
 0.997
PV08_09600
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
   
 0.806
PV08_00074
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.792
PV08_02816
Uncharacterized protein.
    
 0.789
PV08_06019
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.783
PV08_00258
Protein kinase domain-containing protein.
    
 0.781
PV08_11246
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
 0.773
PV08_04708
ENTH domain-containing protein.
    
 0.758
PV08_11132
Uncharacterized protein.
    
 0.747
PV08_06228
ENTH domain-containing protein.
    
 0.744
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.