STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_11199DUF2439 domain-containing protein. (664 aa)    
Predicted Functional Partners:
PV08_11781
Uncharacterized protein.
   
 0.916
PV08_08029
RRM domain-containing protein.
    
 0.908
PV08_03926
Uncharacterized protein.
    
 0.875
PV08_00962
Uncharacterized protein.
    
 0.813
PV08_07627
Nuclear cap-binding protein subunit 2.
    
 0.810
PV08_09065
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
 0.805
PV08_09925
RRM domain-containing protein.
    
 0.803
PV08_11207
Uncharacterized protein.
    
 0.801
PV08_10418
HRDC domain-containing protein.
    
 0.709
PV08_00455
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.709
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.