STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_10903FMN hydroxy acid dehydrogenase domain-containing protein. (389 aa)    
Predicted Functional Partners:
PV08_03033
Aminotran_5 domain-containing protein.
   
 0.770
PV08_02175
Uncharacterized protein.
  
  
 
0.758
PV08_11142
Malate synthase; Belongs to the malate synthase family.
   
 
 0.736
PV08_00676
TPR_REGION domain-containing protein.
    
  0.667
PV08_10235
Isocitrate lyase.
   
 
  0.664
PV08_01413
Isocitrate lyase.
   
 
  0.664
PV08_00223
Polyubiquitin.
    
  0.656
PV08_03243
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.642
PV08_02016
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide. Belongs to the catalase family.
   
 
  0.640
PV08_01853
SH3 domain-containing protein.
     
 0.639
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.