Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09437GH16 domain-containing protein. (638 aa)    
Predicted Functional Partners:
PV08_09388
UBA domain-containing protein.
    
 0.662
PV08_03825
TIGR01456 family HAD hydrolase.
    
  0.624
PV08_05621
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.624
PV08_07533
TIGR01456 family HAD hydrolase.
    
  0.624
PV08_03329
RanBD1 domain-containing protein.
    
 0.607
PV08_09436
Glyco_trans_2-like domain-containing protein.
  
  0.582
PV08_00446
Glyco_trans_2-like domain-containing protein.
  
  0.581
PV08_10071
Glyco_trans_2-like domain-containing protein.
  
  0.581
PV08_10425
Glyco_trans_2-like domain-containing protein.
  
  0.581
PV08_01416
Glyco_trans_2-like domain-containing protein.
  
  0.568
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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