STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09734SET domain-containing protein. (177 aa)    
Predicted Functional Partners:
PV08_00578
CMP/dCMP-type deaminase domain-containing protein.
   
 0.978
PV08_09445
CMP/dCMP-type deaminase domain-containing protein.
   
 0.832
PV08_07605
CMP/dCMP-type deaminase domain-containing protein.
    
 0.813
PV08_11773
Uncharacterized protein.
    
 0.772
PV08_11274
CMP/dCMP-type deaminase domain-containing protein.
    
 0.772
PV08_05448
CMP/dCMP-type deaminase domain-containing protein.
    
 0.772
PV08_06548
CMP/dCMP-type deaminase domain-containing protein.
    
 0.772
PV08_10096
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.705
PV08_00310
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.
    
 0.653
PV08_07678
S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates.
    
 0.637
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.