STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_07054Fungal_trans domain-containing protein. (703 aa)    
Predicted Functional Partners:
PV08_11949
GRIP domain-containing protein.
    
 0.599
PV08_05551
Phosphatase tensin-type domain-containing protein.
    
 0.562
PV08_10350
Ubiquitin-40S ribosomal protein S27a.
    
  0.558
PV08_11376
BZIP domain-containing protein.
    
  0.558
PV08_01928
Ubiquitin-like domain-containing protein.
    
  0.558
PV08_08787
DOC domain-containing protein.
   
  0.514
PV08_11206
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.511
PV08_06538
Uncharacterized protein.
    
 0.508
PV08_10726
Ubiquitin-like domain-containing protein.
    
  0.491
PV08_08639
Uncharacterized protein.
    
  0.491
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (18%) [HD]