STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_07904FMN_red domain-containing protein. (203 aa)    
Predicted Functional Partners:
PV08_07418
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
     
 0.759
PV08_01936
Sulfite reductase (NADPH) hemoprotein, beta-component.
     
 0.705
PV08_07246
Sulfurtransferase.
    
 0.684
PV08_10082
Flavokinase domain-containing protein.
    
 0.668
PV08_09500
Flavokinase domain-containing protein.
    
 0.668
PV08_04744
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
  0.658
PV08_04884
Uncharacterized protein.
     
 0.619
PV08_11501
Riboflavin synthase, alpha subunit.
     
 0.594
PV08_08429
Phosphoadenosine phosphosulfate reductase.
   
 
 0.576
PV08_09163
PAPS_reduct domain-containing protein.
   
 
 0.576
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.