STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_0426860S ribosomal protein L2-B. (254 aa)    
Predicted Functional Partners:
PV08_07813
KOW domain-containing protein.
  
 0.999
PV08_03819
Ribosomal_L23eN domain-containing protein.
  
 0.999
PV08_01470
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.999
PV08_10808
60S ribosomal protein L18-A.
   
 0.999
PV08_09709
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.999
PV08_07154
Uncharacterized protein.
   
 0.999
PV08_07597
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
 0.999
PV08_02750
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
  
 0.999
PV08_10660
Ribosomal_L18A domain-containing protein.
   
 0.999
PV08_08170
60S ribosomal protein L16; Belongs to the universal ribosomal protein uL13 family.
  
 0.999
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.