STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_00622Uncharacterized protein. (710 aa)    
Predicted Functional Partners:
PV08_10336
Response regulatory domain-containing protein.
    
 0.978
PV08_09324
Uncharacterized protein.
   
 0.974
PV08_05493
MPN domain-containing protein.
   
 0.973
PV08_08770
Uncharacterized protein.
    
 0.969
PV08_01267
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.966
PV08_00568
RING-type domain-containing protein.
    
 0.963
PV08_04517
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.961
PV08_10092
DNA-binding protein, 42 kDa.
   
 0.960
PV08_10339
Uncharacterized protein.
   
 0.959
PV08_04798
UBX domain-containing protein.
    
 0.959
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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