STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_00912ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. (556 aa)    
Predicted Functional Partners:
PV08_06262
Uncharacterized protein.
   
 0.999
PV08_06656
ATP synthase subunit 4, mitochondrial.
   
 0.999
PV08_01903
ATP synthase subunit gamma.
 
 0.999
PV08_08960
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
0.999
PV08_01019
ATP synthase subunit delta, mitochondrial.
  
 0.999
PV08_01463
ATP synthase F1, delta subunit.
  
 0.999
PV08_03150
Uncharacterized protein.
   
 0.998
PV08_09543
Uncharacterized protein.
   
 0.994
PV08_02833
Uncharacterized protein.
   
 0.994
PV08_04903
Cytochrome c1, heme protein, mitochondrial.
   
 0.992
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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