STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_01112Uncharacterized protein. (482 aa)    
Predicted Functional Partners:
PV08_05735
60S ribosomal protein L10-A.
    
 
 0.985
PV08_06788
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.789
PV08_04497
Fes1 domain-containing protein.
    
 
 0.789
PV08_04526
Uncharacterized protein.
 
      0.764
PV08_09517
WD_REPEATS_REGION domain-containing protein.
   
  
 0.746
PV08_01559
Uncharacterized protein.
   
  
 0.746
PV08_04666
WD_REPEATS_REGION domain-containing protein.
   
    0.715
PV08_01617
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.704
PV08_02135
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
  
 0.693
PV08_07318
WD_REPEATS_REGION domain-containing protein.
   
  
 0.634
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.