STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_01847Vps8 domain-containing protein. (1590 aa)    
Predicted Functional Partners:
PV08_09340
E3 ubiquitin-protein ligase PEP5.
    
 
 0.987
PV08_09751
Pep3_Vps18 domain-containing protein.
    
 
 0.987
PV08_00763
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.975
PV08_03123
CNH domain-containing protein.
   
 
 0.939
PV08_05219
CNH domain-containing protein.
   
 
 0.935
PV08_02148
Probable vacuolar protein sorting-associated protein 16 homolog; Essential for vacuolar protein sorting. Required for vacuole biogenesis, stability and to maintain vacuole morphology.
    
 
 0.926
PV08_11102
Uncharacterized protein.
    
 
 0.919
PV08_02427
PIG-P domain-containing protein.
 
      0.795
PV08_01355
GTP-binding protein ypt5.
    
 
 0.791
PV08_05404
Uncharacterized protein.
    
 
 0.791
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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