STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_10703Lactamase_B domain-containing protein. (294 aa)    
Predicted Functional Partners:
PV08_10256
Uncharacterized protein.
   
   0.839
PV08_02153
50S ribosomal protein L4.
   
 
 0.839
PV08_06788
Ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
  0.827
PV08_04927
Uncharacterized protein.
   
 
 0.821
PV08_07133
Uncharacterized protein.
   
 
 0.817
PV08_10137
MRP-L46 domain-containing protein.
   
   0.797
PV08_04371
Ribosomal protein L13.
   
 
 0.785
PV08_11576
Uncharacterized protein.
   
   0.781
PV08_08564
50S ribosomal protein L3.
   
   0.775
PV08_03852
Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.769
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.