STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09093Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (496 aa)    
Predicted Functional Partners:
PV08_05769
Acetyl-coenzyme A synthetase.
   
 0.845
PV08_11232
Uncharacterized protein.
   
 0.809
PV08_05300
Methylmalonate-semialdehyde dehydrogenase (Acylating).
    
0.803
PV08_10617
PKS_ER domain-containing protein.
 
 
 
 0.796
PV08_09760
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.794
PV08_11429
Uncharacterized protein.
   
 0.779
PV08_10436
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
   
  0.778
PV08_07998
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.774
PV08_06356
Uncharacterized protein.
    
  0.772
PV08_07675
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 0.766
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.