STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_09284Uncharacterized protein. (779 aa)    
Predicted Functional Partners:
PV08_03329
RanBD1 domain-containing protein.
   
 0.999
PV08_10563
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.982
PV08_00216
Uncharacterized protein.
   
 0.934
PV08_01449
Uncharacterized protein.
   
 0.932
PV08_00559
Uncharacterized protein.
   
 0.932
PV08_09306
Nup54 domain-containing protein.
   
 0.929
PV08_08105
Ubiquitin-like domain-containing protein.
   
 0.928
PV08_00176
Uncharacterized protein.
   
 0.928
PV08_08260
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.920
PV08_06755
Importin N-terminal domain-containing protein.
   
 
 0.919
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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