STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_07722Translation initiation factor IF-2. (1160 aa)    
Predicted Functional Partners:
PV08_06102
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.984
PV08_04140
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.973
PV08_02157
Ribosomal protein L15.
   
 0.972
PV08_11750
60S ribosomal protein L5.
   
 
 0.970
PV08_04403
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.968
PV08_01920
Ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 0.966
PV08_03819
Ribosomal_L23eN domain-containing protein.
   
 
 0.964
PV08_05412
Uncharacterized protein.
   
 0.963
PV08_02188
Ribosomal protein S6.
   
 0.963
PV08_09187
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.961
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.