STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_06101Phenylalanine-tRNA ligase, beta subunit. (602 aa)    
Predicted Functional Partners:
PV08_03612
Phenylalanine-tRNA ligase, alpha subunit.
  
 0.993
PV08_06839
Phenylalanine-tRNA ligase.
  
 0.992
PV08_10057
CFEM domain-containing protein.
  
 0.989
PV08_10062
CFEM domain-containing protein.
  
 0.989
PV08_08491
Uncharacterized protein.
 
 
    0.942
PV08_11387
Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.917
PV08_07557
Leucine-tRNA ligase.
  
  
 0.908
PV08_05907
Leucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.908
PV08_04885
Isoleucine-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.907
PV08_04140
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.894
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.