STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_04454Uncharacterized protein. (559 aa)    
Predicted Functional Partners:
PV08_10336
Response regulatory domain-containing protein.
    
 0.732
PV08_09185
Uncharacterized protein.
    
 0.715
PV08_07088
SH3 domain-containing protein.
    
 0.686
PV08_01956
Uncharacterized protein.
   
 0.678
PV08_08566
Uncharacterized protein.
    
 0.667
PV08_03340
Uncharacterized protein.
    
  0.663
PV08_07594
Uncharacterized protein.
    
 0.661
PV08_11287
Flavin_Reduct domain-containing protein.
    
 0.645
PV08_00745
Hsp90-like protein.
    
 0.645
PV08_11402
RING-type domain-containing protein.
   
  0.642
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.