STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_04110Fcf2 domain-containing protein. (228 aa)    
Predicted Functional Partners:
PV08_09906
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.993
PV08_11422
Uncharacterized protein.
   
 
 0.992
PV08_09931
Sas10 domain-containing protein.
   
 
 0.992
PV08_10119
Uncharacterized protein.
   
 
 0.991
PV08_08591
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
   0.990
PV08_08617
Brix domain-containing protein.
   
   0.990
PV08_06744
Utp12 domain-containing protein.
   
 
 0.989
PV08_06111
Bms1-type G domain-containing protein.
   
 
 0.989
PV08_07273
WD_REPEATS_REGION domain-containing protein.
   
 
 0.988
PV08_04388
Uncharacterized protein.
   
 
 0.987
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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