STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_03009Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
PV08_01412
Uncharacterized protein.
    
   0.730
PV08_07854
40S ribosomal protein S19.
   
 
 0.728
PV08_11169
Histone chaperone; Histone chaperone that facilitates histone deposition and histone exchange and removal during nucleosome assembly and disassembly.
    
 0.713
PV08_08488
Uncharacterized protein.
    
  0.713
PV08_03329
RanBD1 domain-containing protein.
    
  0.704
PV08_06322
Uncharacterized protein.
    
   0.699
PV08_08174
Protein HIR; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.641
PV08_04140
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
   0.627
PV08_03447
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.613
PV08_04368
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
   0.601
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.