STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_03199BCNT-C domain-containing protein. (336 aa)    
Predicted Functional Partners:
PV08_05793
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
   
 
 0.948
PV08_02879
SANT domain-containing protein.
   
 
 0.939
PV08_09372
Histone H2A; Belongs to the histone H2A family.
    
 
 0.919
PV08_05475
Uncharacterized protein.
    
 
 0.917
PV08_09558
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 
 0.908
PV08_10110
YL1_C domain-containing protein.
   
 
 0.867
PV08_05630
Uncharacterized protein.
    
 
 0.837
PV08_05664
Uncharacterized protein.
    
 
 0.797
PV08_10933
Uncharacterized protein.
    
 
 0.743
PV08_00051
Uncharacterized protein.
    
 
 0.743
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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