STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_03574Uncharacterized protein. (851 aa)    
Predicted Functional Partners:
PV08_08566
Uncharacterized protein.
    
 0.951
PV08_09185
Uncharacterized protein.
    
 0.869
PV08_07979
ATP-dependent DNA helicase II subunit 2; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.802
PV08_01589
DNA ligase.
    
 0.782
PV08_08463
Uncharacterized protein.
    
 0.642
PV08_01105
SAP domain-containing protein.
    
 0.642
PV08_07105
Protein kinase domain-containing protein.
    
 0.607
PV08_05860
Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.
    
 0.607
PV08_05999
Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily.
    
 0.607
PV08_10418
HRDC domain-containing protein.
    
 0.600
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.