STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_00815Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
PV08_04140
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
   
  0.814
PV08_06102
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.813
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.813
PV08_03263
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
  0.812
PV08_05298
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.810
PV08_07833
40S ribosomal protein S20.
   
  0.808
PV08_05699
Uncharacterized protein.
   
  0.807
PV08_07854
40S ribosomal protein S19.
   
  0.802
PV08_04370
40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family.
   
 0.785
PV08_03447
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.779
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.