STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_01368R3H domain-containing protein. (486 aa)    
Predicted Functional Partners:
PV08_09653
Peptidylprolyl isomerase.
    
   0.807
PV08_00055
Peptidylprolyl isomerase.
    
   0.807
PV08_03819
Ribosomal_L23eN domain-containing protein.
    
   0.766
PV08_07854
40S ribosomal protein S19.
    
   0.766
PV08_04977
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
   0.766
PV08_04286
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
    
   0.766
PV08_04140
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.766
PV08_06815
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
   0.761
PV08_06054
Uncharacterized protein.
    
 
 0.759
PV08_06214
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
    
 
 0.759
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.