STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_01413Isocitrate lyase. (593 aa)    
Predicted Functional Partners:
PV08_11142
Malate synthase; Belongs to the malate synthase family.
 
 
 0.993
PV08_03052
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.874
PV08_10837
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.846
PV08_11189
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.843
PV08_03033
Aminotran_5 domain-containing protein.
  
 
 0.840
PV08_11273
DAO domain-containing protein.
   
 
 0.817
PV08_11683
DAO domain-containing protein.
   
 
 0.817
PV08_10599
DAO domain-containing protein.
   
 
 0.817
PV08_01414
Citrate synthase; Belongs to the citrate synthase family.
  
 0.803
PV08_08677
Citrate synthase; Belongs to the citrate synthase family.
  
 0.803
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.