STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_02028Mannan endo-1,6-alpha-mannosidase. (459 aa)    
Predicted Functional Partners:
PV08_07651
Uncharacterized protein.
    
 0.850
PV08_07495
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.835
PV08_04720
Protein kinase domain-containing protein.
    
 
 0.646
PV08_10630
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.593
PV08_04756
Uncharacterized protein.
  
 
   0.592
PV08_09237
Thioredoxin.
    
 
 0.576
PV08_05755
Chloride channel protein.
      
 0.567
PV08_01769
Chloride channel protein.
      
 0.567
PV08_00455
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.497
PV08_11420
Histidinol-phosphate transaminase.
 
    
 0.485
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.