STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_01780Uncharacterized protein. (735 aa)    
Predicted Functional Partners:
PV08_02985
Spindle pole body component.
    
 0.824
PV08_01819
Spindle pole body component.
    
 0.748
PV08_07224
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.705
PV08_00629
Spindle pole body component.
    
 0.682
PV08_07713
Spindle pole body component.
    
 0.680
PV08_06442
Spindle pole body component.
    
 0.680
PV08_07107
Uncharacterized protein.
    
 0.680
PV08_02438
Nucleoside diphosphate kinase.
    
 0.653
PV08_06328
Uncharacterized protein.
    
 0.645
PV08_05995
Uncharacterized protein.
    
 0.645
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.