STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_07861Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (396 aa)    
Predicted Functional Partners:
PV08_06835
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.824
PV08_03386
Uncharacterized protein.
   
 0.770
PV08_11986
Uncharacterized protein.
   
 0.745
PV08_02994
Cytochrome c oxidase subunit 6, mitochondrial.
   
 0.729
PV08_06931
Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.726
PV08_09305
Uncharacterized protein.
     
 0.692
PV08_08959
Cytochrome c oxidase polypeptide 5, mitochondrial.
   
 0.690
PV08_00848
Uncharacterized protein.
   
  0.605
PV08_05624
Beta-hexosaminidase.
     
 0.583
PV08_06135
Beta-hexosaminidase.
     
 0.583
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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