STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_05804Tr-type G domain-containing protein. (702 aa)    
Predicted Functional Partners:
PV08_04062
Eukaryotic peptide chain release factor subunit 1.
   
 0.999
PV08_08618
Helicase ATP-binding domain-containing protein.
    
 0.948
PV08_09065
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 0.947
PV08_08405
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
 
  
   0.912
PV08_06102
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.897
PV08_02841
Translation initiation factor RLI1.
   
 
 0.892
PV08_01412
Uncharacterized protein.
   
 
 0.877
PV08_10582
Hsp98-like protein; Belongs to the ClpA/ClpB family.
    
 
 0.872
PV08_10077
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.838
PV08_00940
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
 0.815
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.