STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV08_03862MADS-box domain-containing protein. (210 aa)    
Predicted Functional Partners:
PV08_04891
Uncharacterized protein.
    
 0.992
PV08_06661
Homeobox domain-containing protein.
    
 0.896
PV08_00742
Uncharacterized protein.
    
 0.889
PV08_03478
Clr5 domain-containing protein.
    
 0.889
PV08_04476
GATA-type domain-containing protein.
    
 0.884
PV08_04967
Uncharacterized protein.
    
 0.829
PV08_11877
Protein kinase domain-containing protein.
    
 0.810
PV08_07205
Protein kinase domain-containing protein.
    
 0.810
PV08_02640
Protein kinase domain-containing protein.
    
 0.810
PV08_03980
Protein kinase domain-containing protein.
    
 0.810
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.