Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PV08_01019 | PV08_03218 | A0A0D2CA60 | A0A0D2C5V3 | ATP synthase subunit delta, mitochondrial. | Zn(2)-C6 fungal-type domain-containing protein. | 0.423 |
PV08_03146 | PV08_03218 | A0A0D2A1M2 | A0A0D2C5V3 | Uncharacterized protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.414 |
PV08_03146 | PV08_03423 | A0A0D2A1M2 | A0A0D1YV24 | Uncharacterized protein. | SCP2 domain-containing protein. | 0.582 |
PV08_03218 | PV08_01019 | A0A0D2C5V3 | A0A0D2CA60 | Zn(2)-C6 fungal-type domain-containing protein. | ATP synthase subunit delta, mitochondrial. | 0.423 |
PV08_03218 | PV08_03146 | A0A0D2C5V3 | A0A0D2A1M2 | Zn(2)-C6 fungal-type domain-containing protein. | Uncharacterized protein. | 0.414 |
PV08_03218 | PV08_03423 | A0A0D2C5V3 | A0A0D1YV24 | Zn(2)-C6 fungal-type domain-containing protein. | SCP2 domain-containing protein. | 0.481 |
PV08_03218 | PV08_04003 | A0A0D2C5V3 | A0A0D2BCX0 | Zn(2)-C6 fungal-type domain-containing protein. | 4-hydroxyphenylpyruvate dioxygenase. | 0.422 |
PV08_03218 | PV08_07418 | A0A0D2C5V3 | A0A0D2BTR4 | Zn(2)-C6 fungal-type domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.501 |
PV08_03218 | PV08_09488 | A0A0D2C5V3 | A0A0D1ZGX7 | Zn(2)-C6 fungal-type domain-containing protein. | Carrier domain-containing protein. | 0.414 |
PV08_03218 | PV08_09493 | A0A0D2C5V3 | A0A0D1ZGY4 | Zn(2)-C6 fungal-type domain-containing protein. | Carrier domain-containing protein. | 0.414 |
PV08_03218 | PV08_09662 | A0A0D2C5V3 | A0A0D2B120 | Zn(2)-C6 fungal-type domain-containing protein. | Uncharacterized protein. | 0.414 |
PV08_03218 | PV08_10814 | A0A0D2C5V3 | A0A0D2AXX2 | Zn(2)-C6 fungal-type domain-containing protein. | BTB domain-containing protein. | 0.414 |
PV08_03218 | PV08_11282 | A0A0D2C5V3 | A0A0D2AUZ3 | Zn(2)-C6 fungal-type domain-containing protein. | SAT domain-containing protein. | 0.414 |
PV08_03423 | PV08_03146 | A0A0D1YV24 | A0A0D2A1M2 | SCP2 domain-containing protein. | Uncharacterized protein. | 0.582 |
PV08_03423 | PV08_03218 | A0A0D1YV24 | A0A0D2C5V3 | SCP2 domain-containing protein. | Zn(2)-C6 fungal-type domain-containing protein. | 0.481 |
PV08_03423 | PV08_07418 | A0A0D1YV24 | A0A0D2BTR4 | SCP2 domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.610 |
PV08_03423 | PV08_09488 | A0A0D1YV24 | A0A0D1ZGX7 | SCP2 domain-containing protein. | Carrier domain-containing protein. | 0.582 |
PV08_03423 | PV08_09493 | A0A0D1YV24 | A0A0D1ZGY4 | SCP2 domain-containing protein. | Carrier domain-containing protein. | 0.582 |
PV08_03423 | PV08_09662 | A0A0D1YV24 | A0A0D2B120 | SCP2 domain-containing protein. | Uncharacterized protein. | 0.582 |
PV08_03423 | PV08_10814 | A0A0D1YV24 | A0A0D2AXX2 | SCP2 domain-containing protein. | BTB domain-containing protein. | 0.582 |
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